Multiplying by Dividing

Organisms most frequently copy their Instruction Books by asexual reproduction. Cells reproducing asexually divide in two, and each of the new cells gets a copy of the original cell's Instruction Book. The old cell is called the parent cell and the two new ones are called daughter cells. Prokaryotes reproduce asexually, as do some eukaryotes. Multicellular eukaryotes grow by mitosis, a kind of asexual division.

The essential details of how living things asexually copy their Instruction Books are the same, despite differences between prokaryotes, unicellular eukaryotes and multicellular eukaryotes. In all cases, copying the Instruction Book begins with a worker called a helicase binding to a special note in the Book and unwinding a short stretch of its DNA. A complex of eight large workers then unzips the DNA's double strands, reads the bases on each strand, and builds a new strand to go with each of the old ones. The bases that make up each new strand complement the bases in each old strand, so the new DNA double helices are identical to the original one. This method of copying the Instruction Book gives each daughter cell an Instruction Book that consists of one strand of the parent's DNA and one strand of new DNA.

Actually, the new Instruction Books aren't perfectly identical to to the parental ones. The workers that copy Instruction Books try very hard to make perfect copies of them, but once in a long while they make a mistake. Approximately once every ten thousand bases, the workers insert the wrong base into a new DNA strand. Since the Instruction Books for humans has around six billion bases, this would introduce six hundred thousand mistakes into subsequent copies. However, repair workers -- working both at the time the Book is copied and later -- catch almost all of these changes, leaving only one in a billion bases changed. For humans, this leaves only a handful of changes overall, usually fewer than ten. These changes (called point mutations, because they affect DNA at a single spot, or point) produce changes in the workers made by the Instructions where they occur. Their significance depends on the genetic code and where in the Instruction they fall.

The genetic code's construction prevents many point mutations from changing the Instruction they occur in. For example, changing the codon CTG to CTA still adds the same link (L) to the worker made from this Instruction. This kind of mutation -- one that doesn't even change the link -- is called a silent mutation. Many other sorts of point mutations change the link added to the worker, but replace it with one that has similar properties. Changing CTG to TTG replaces L with I, which is conservative replacement.

However, there are some kinds of point mutations that do change the worker in some way. If these changes occur in the part of the Instruction that codes for scaffolding, the worker made by the mutated Instruction will likely have slightly different specificity than the one made by the original Instruction. Point mutations that change a worker's active sites produce greater effects. They may produce large changes in the worker's specificity. They may change the job the worker does. They may simply prevent the worker from doing any job at all, although this is rare. The three alleles for alcohol dehydrogenase I differ from each other by single point mutations. These point mutations change only how fast the workers do their jobs. Alcohol dehydrogenase IV is about 80 point mutations away from any alcohol dehydrogenase I; it's much faster than they are, and it works on slightly different alcohols. Further along the spectrum, alcohol dehydrogenase II differs from any of the alcohol dehydrogenase I's by about 160 point mutations, and has a very different specificity.


Al and alcohol dehydrogenase IV

Alcohol dehydrogenase III differs from I about as much as II does. The numbers just indicate order of discovery, not similarity.

One particular type of point mutation is especially bad. If a codon is mutated to one of the three stop codons, then when the Instruction is expressed, the ribosome making the worker stops translating there and the worker is truncated. If this occurs near the start of the Instruction, only a useless fragment of the worker is made. These point mutations are called nonsense mutations. Nonsense mutations are the cause of some human genetic diseases. Some kinds of thalassemia (a type of anemia) are caused by a nonsense mutation in hemoglobin, the worker in blood that carries oxygen. People who have these diseases produce only a stub of one of the two workers in the hemoglobin complex. As a result, their blood doesn't carry oxygen very well.

Since point mutations can occur anywhere in the Instruction Book when it's copied, they can also affect promoters and other notes in the Book. Point mutations to promoters can either strengthen the promoter or weaken it. While this doesn't change the worker produced, it changes the amount of the worker made by the organism. If a promoter becomes so weak that the dispatchers no longer recognize it, the Instruction becomes a psuedogene. Point mutations in promoters can also change which dispatchers recognize it, causing it to be expressed under different conditions.

Note that while point mutations are always inherited by the offspring of unicellular organisms, point mutations in multicellular organisms are inherited only if they occur in their germ line, or the cells that develop into it. Point mutations in somatic cells affect only later growth of the organism, not its offspring.

A point mutation can be undone by another one at the same spot. The same random process of making mistakes in copying Life's Instruction Book undoes changes as well as making them. For example, if a point mutation in a promoter produced a psuedogene, another point mutation in that promoter during subsequent asexual reproduction may restore the Instruction to use. This means that even though an organism is stuck with any mutational difference it inherited from its parents, its offspring may revert (or change back) to the older Instruction.

While asexual reproduction is adequate for reproducing simple organisms, complex organisms have developed another method for copying their Instruction Books: sexual reproduction.

Part One: Reading the Book

Part Two: Copying the Book
Styles of Copying the Book
Multiplying by Dividing
Birds and Bees
Sharing Chapters
Smudging the Book
Is Change Good?

Part Three: Improving the Book

Table of Contents
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